STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_100035Penicillin-binding protein 1C. (696 aa)    
Predicted Functional Partners:
MPLA_100036
Apple domain-containing protein.
 
   
 0.939
ddpX
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
       0.780
mrcA
Penicillin-binding protein 1A.
  
  
0.750
MPLA_1190094
Peptidoglycan glycosyltransferase.
     
 0.731
mtgA
Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 
0.722
MPLA_1800217
1A family penicillin-binding protein.
  
  
0.715
MPLA_1650111
Penicillin-binding protein.
  
  
0.711
MPLA_1830106
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
     
  0.658
MPLA_1830277
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
     
  0.624
MPLA_210008
Penicillin-binding protein; Belongs to the peptidase S11 family.
     
  0.624
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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