Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1070023Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
MPLA_190011
N-acetyltransferase domain-containing protein.
  
    0.925
gltB
Glutamate synthase, large subunit.
     
  0.707
icd
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
     
  0.582
stcD
Putative N-methylproline demethylase.
    
  0.550
MPLA_240010
Rieske domain-containing protein.
 
  
  0.477
glxB
Glutamine amidotransferase-like protein glxB.
     
  0.438
glxC
Protein GlxC.
     
  0.438
MPLA_660043
Putative large subunit of glutamate synthase; Belongs to the glutamate synthase family.
     
  0.434
soxA
Sarcosine oxidase subunit alpha.
     
  0.416
MPLA_160087
Sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
     
  0.416
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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