Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
MPLA_1100007Putative Norsolorinic acid reductase. (348 aa)    
Predicted Functional Partners:
dkgA
2,5-diketo-D-gluconate reductase A.
 
  0.659
yeaE
Putative oxidoreductase.
 
 
0.557
MPLA_930007
WD-repeart protein, beta transducin-like.
   
  0.541
MPLA_1620047
Uncharacterized protein.
    
  0.530
MPLA_340150
Uncharacterized protein.
    
  0.530
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
     
  0.431
MPLA_160024
ATPase_AAA_core domain-containing protein.
    
   0.424
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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