Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1100029SnoaL-like domain-containing protein. (120 aa)    
Predicted Functional Partners:
MPLA_1800241
Transcriptional regulator, XRE family.
 
     0.782
mutB
Methylmalonyl-CoA mutase large subunit (MCM-alpha).
    
 0.745
MPLA_1820002
Uncharacterized protein.
  
     0.689
MPLA_140111
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
  
  0.631
MPLA_90020
AB hydrolase-1 domain-containing protein.
  
  
  0.620
MPLA_1390038
Alpha/beta hydrolase fold protein.
  
  
  0.599
MPLA_160013
Beta-lactamase domain-containing protein.
   
 0.561
MPLA_750068
Beta-lactamase domain-containing protein.
   
 0.561
MPLA_750098
Uncharacterized protein.
   
 0.561
MPLA_750099
Beta-lactamase domain-containing protein.
   
 0.561
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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