Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1170046GtrA family protein. (145 aa)    
Predicted Functional Partners:
ykcC
Uncharacterized glycosyltransferase YkcC.
  
 
 0.844
MPLA_1170045
Methyltransferase type 11.
       0.795
MPLA_1170047
Uncharacterized protein.
       0.789
coaA
Pantothenate kinase.
       0.565
hisE
Phosphoribosyl-ATP pyrophosphatase.
       0.482
MPLA_440036
Putative pterin-4-alpha-carbinolamine dehydratase.
     
  0.459
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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