Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1190027Uncharacterized protein. (1172 aa)    
Predicted Functional Partners:
MPLA_1190028
Uncharacterized protein.
   
   0.921
MPLA_1190026
Uncharacterized protein.
   
   0.897
MPLA_1190025
Uncharacterized protein.
    
  0.810
MPLA_1190029
Uncharacterized protein.
       0.797
gltB
Glutamate synthase, large subunit.
     
 0.781
MPLA_1190030
Uncharacterized protein.
       0.773
MPLA_1190031
Peptidase_M15_4 domain-containing protein.
       0.771
MPLA_1190032
Uncharacterized protein.
       0.768
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
  0.737
MPLA_1190024
Acyltransferase 3.
  
    0.709
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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