Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1190132Uncharacterized protein. (164 aa)    
Predicted Functional Partners:
MPLA_140076
Uncharacterized protein.
  
     0.766
MPLA_530003
Multicopper oxidase type 3.
    
 
 0.659
MPLA_1350070
Putative outer membrane protein.
  
    0.591
MPLA_680094
Outer membrane protein.
  
    0.475
MPLA_140088
DUF892 domain-containing protein.
   
    0.467
MPLA_930059
DUF892 domain-containing protein.
   
    0.467
MPLA_140067
DUF4142 domain-containing protein.
  
    0.463
MPLA_1530034
DUF892 domain-containing protein.
  
    0.458
MPLA_140075
DUF892 domain-containing protein.
  
    0.446
MPLA_1200009
DUF892 domain-containing protein.
  
    0.435
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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