MPLA_1200016 protein (Mesorhizobium sp. ORS3359)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-expression

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[Homology]

Score

MPLA_1200016

Uncharacterized protein. (94 aa)

Predicted Functional Partners:

gltB

0.781

guaA

0.737

MPLA_670082

0.656

MPLA_1190028

0.638

MPLA_930054

0.612

guaB

0.604

MPLA_310021

0.602

MPLA_870026

0.587

MPLA_1100041

0.570

MPLA_1190026

0.570

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_1100041	MPLA_1200016	MPLA_1100041	MPLA_1200016	Uncharacterized protein.	Uncharacterized protein.	0.570
MPLA_1100041	MPLA_310021	MPLA_1100041	MPLA_310021	Uncharacterized protein.	Uncharacterized protein.	0.618
MPLA_1100041	MPLA_870026	MPLA_1100041	MPLA_870026	Uncharacterized protein.	Uncharacterized protein.	0.563
MPLA_1190026	MPLA_1190028	MPLA_1190026	MPLA_1190028	Uncharacterized protein.	Uncharacterized protein.	0.934
MPLA_1190026	MPLA_1200016	MPLA_1190026	MPLA_1200016	Uncharacterized protein.	Uncharacterized protein.	0.570
MPLA_1190026	MPLA_870026	MPLA_1190026	MPLA_870026	Uncharacterized protein.	Uncharacterized protein.	0.722
MPLA_1190026	MPLA_930054	MPLA_1190026	MPLA_930054	Uncharacterized protein.	dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.	0.749
MPLA_1190028	MPLA_1190026	MPLA_1190028	MPLA_1190026	Uncharacterized protein.	Uncharacterized protein.	0.934
MPLA_1190028	MPLA_1200016	MPLA_1190028	MPLA_1200016	Uncharacterized protein.	Uncharacterized protein.	0.638
MPLA_1190028	MPLA_870026	MPLA_1190028	MPLA_870026	Uncharacterized protein.	Uncharacterized protein.	0.723
MPLA_1190028	MPLA_930054	MPLA_1190028	MPLA_930054	Uncharacterized protein.	dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.	0.698
MPLA_1200016	MPLA_1100041	MPLA_1200016	MPLA_1100041	Uncharacterized protein.	Uncharacterized protein.	0.570
MPLA_1200016	MPLA_1190026	MPLA_1200016	MPLA_1190026	Uncharacterized protein.	Uncharacterized protein.	0.570
MPLA_1200016	MPLA_1190028	MPLA_1200016	MPLA_1190028	Uncharacterized protein.	Uncharacterized protein.	0.638
MPLA_1200016	MPLA_310021	MPLA_1200016	MPLA_310021	Uncharacterized protein.	Uncharacterized protein.	0.602
MPLA_1200016	MPLA_670082	MPLA_1200016	MPLA_670082	Uncharacterized protein.	Uncharacterized protein.	0.656
MPLA_1200016	MPLA_870026	MPLA_1200016	MPLA_870026	Uncharacterized protein.	Uncharacterized protein.	0.587
MPLA_1200016	MPLA_930054	MPLA_1200016	MPLA_930054	Uncharacterized protein.	dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.	0.612
MPLA_1200016	gltB	MPLA_1200016	MPLA_140317	Uncharacterized protein.	Glutamate synthase, large subunit.	0.781
MPLA_1200016	guaA	MPLA_1200016	MPLA_1650100	Uncharacterized protein.	GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.	0.737