Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_120009Transcriptional regulator, IclR family. (260 aa)    
Predicted Functional Partners:
pcaR
Pca regulon regulatory protein.
  
     0.702
MPLA_120010
Bug family protein.
 
  
 0.645
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
  0.586
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
    
 0.576
MPLA_180037
Transcriptional regulator.
  
     0.575
MPLA_340130
Indolepyruvate ferredoxin oxidoreductase.
     
  0.559
MPLA_120007
Activator of Hsp90 ATPase-like protein.
       0.556
MPLA_120008
Putative transcriptional regulatory protein, ArsR family.
  
    0.556
MPLA_120012
Uncharacterized 52.8 kDa protein in TAR-I ttuC' 3'region.
 
     0.520
aspC
Aminotransferase.
     
  0.520
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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