STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_120027Oxidoreductase domain protein. (363 aa)    
Predicted Functional Partners:
MPLA_1100051
Family 1 extracellular solute-binding protein.
 
     0.705
MPLA_140044
Xylose isomerase domain protein TIM barrel.
  
 
  0.689
MPLA_1100052
Sugar ABC transporter, permease protein.
 
     0.681
MPLA_120028
NMT1 domain-containing protein.
 
  
  0.641
MPLA_1100053
Sugar transport inner membrane protein.
 
     0.638
MPLA_1100048
GntR family transcriptional regulator.
  
    0.554
MPLA_1390090
Xylose isomerase domain protein TIM barrel.
  
 
  0.548
MPLA_1610028
Xylose isomerase domain-containing protein TIM barrel.
  
 
  0.541
MPLA_140002
Xylose isomerase domain protein TIM barrel.
 
 
  0.524
MPLA_1100047
Glucosamine-fructose-6-phosphate aminotransferase.
  
     0.512
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.