Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1240008Peptidase S10 serine carboxypeptidase. (499 aa)    
Predicted Functional Partners:
MPLA_770081
Uncharacterized protein.
   
 0.888
MPLA_1620050
Uncharacterized protein.
  
 
  0.847
icd
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
  0.761
MPLA_2130144
Metallophosphoesterase.
     
  0.725
MPLA_2130147
AAA_13 domain-containing protein.
     
  0.725
rhlE
RNA helicase.
    
  0.696
MPLA_440005
DEAD/DEAH helicase; Belongs to the DEAD box helicase family.
    
  0.696
aroE
Shikimate dehydrogenase (NADP(+)); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
    
   0.682
MPLA_1850034
PEBP family protein.
   
 
 0.669
MPLA_1380016
DnaK-type molecular chaperone DnaK.
    
 
 0.629
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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