Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MPLA_1280049Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (717 aa)    
Predicted Functional Partners:
ynfG
Oxidoreductase, Fe-S subunit.
 
 0.981
fixP
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.949
fixP-2
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.949
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.924
MPLA_20046
NADH-ubiquinone dehydrogenase subunit.
   
 0.898
MPLA_20048
NADH-quinone oxidoreductase, E subunit.
   
 0.898
MPLA_830047
Cytochrome c-like protein.
  
 0.866
MPLA_320070
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein.
  
 0.860
MPLA_140098
Cytochrome c oxidase, subunit II.
   
 0.859
MPLA_860087
Hydrogenase 3, large subunit.
    
 0.817
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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