STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1280101Uncharacterized protein. (240 aa)    
Predicted Functional Partners:
MPLA_780001
Uncharacterized protein.
  
    0.632
MPLA_660030
Transcriptional regulator, XRE family.
  
    0.618
lcdH
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
 
 0.540
MPLA_1280100
Amidinotransferase.
 
     0.538
catI
3-oxoadipate CoA-transferase subunit A.
    
 0.531
catJ
3-oxoadipate CoA-transferase subunit B.
    
 0.516
yciA
Putative hydrolase.
    
  0.511
MPLA_1060010
Rubrerythrin domain-containing protein.
     
  0.479
MPLA_1390032
Alpha/beta hydrolase fold protein.
    
  0.466
MPLA_1280099
Uncharacterized protein.
       0.411
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.