Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MPLA_130011Two-component response regulator. (200 aa)    
Predicted Functional Partners:
MPLA_130012
Nitrate transporter component, nrtA.
 
  
 0.972
nasD
Nitrite reductase (NAD(P)H); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.897
nasE
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
  
 0.891
nasA
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.882
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.833
MPLA_1840019
Putative branched-chain amino acid ABC transporter (Substrate-binding protein).
 
   0.663
MPLA_140089
Uncharacterized protein.
 
   0.654
rpsA
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
    0.644
MPLA_1800149
PAS sensor protein.
    
 0.643
amtB
Ammonium transporter.
  
  
 0.633
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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