Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MPLA_1350012ATPase domain-containing protein. (467 aa)    
Predicted Functional Partners:
MPLA_1350011
Two-component system response regulator.
 
 0.978
uhpA
DNA-binding response regulator in two-component regulatory system wtih UhpB.
 
 0.901
MPLA_870016
Two component transcriptional regulator, LuxR family.
 
 0.899
sgaR
Putative transcriptional regulatory protein sgaR.
 
 0.889
MPLA_720056
Putative sensor/response regulator hybrid protein.
 
 0.878
MPLA_1830193
Two-component response regulator protein.
 
 0.866
MPLA_1950002
Uncharacterized protein.
  
 0.854
MPLA_80055
Respose regulatory protein.
 
 0.851
MPLA_910002
Blue-light-activated protein.
  
 0.844
agmR-2
Glycerol metabolism activator.
 
 0.843
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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