Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
actRAcid tolerance regulatory protein ActR. (181 aa)    
Predicted Functional Partners:
MPLA_1360007
Two-component, sensor histidine protein kinase.
 
  
 0.991
regB
Sensor histidine kinase RegB.
 
 0.976
MPLA_1360006
SURF1-like protein.
 
     0.893
cyoD
Cytochrome o ubiquinol oxidase, subunit IV.
 
     0.842
MPLA_720056
Putative sensor/response regulator hybrid protein.
 
 
 0.836
MPLA_1360002
Cytochrome o ubiquinol oxidase subunit II.
 
     0.827
cyoC
Cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C).
 
     0.825
regR
Two-component transcriptional regulator RegR, Fis family.
     
  0.822
MPLA_200019
Histidine kinase.
 
  
 0.811
cyoB
Cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain A); Belongs to the heme-copper respiratory oxidase family.
 
     0.809
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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