Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MPLA_1360013Arylmalonate decarboxylase. (261 aa)    
Predicted Functional Partners:
ocd
Ornithine cyclodeaminase 1.
 
     0.876
MPLA_1360010
Uncharacterized hydrolase/peptidase y4tM.
 
     0.860
MPLA_1360009
Ectoine utilization protein EutE.
 
     0.853
sdhA
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.827
aspC
Aminotransferase.
     
  0.822
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.822
MPLA_340045
Asparagine synthase.
     
  0.822
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.822
sdhC
Succinate dehydrogenase, membrane subunit, binds cytochrome b556.
     
  0.822
MPLA_480003
Succinate dehydrogenase, hydrophobic membrane anchor protein.
     
  0.822
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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