Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
yecSPutative transporter subunit: permease component of ABC superfamily transporter. (219 aa)    
Predicted Functional Partners:
MPLA_1360016
Amino acid ABC transporter protein, solute-binding component.
 
  0.993
MPLA_1360014
Putative amino-acid ABC transporter permease protein y4tG.
 
  
 
0.987
aapP
Amino-acid transporter subunit ATP-binding component of ABC superfamily.
 
  0.980
glnH
Glutamine transporter subunit periplasmic binding component of ABC superfamily; Belongs to the bacterial solute-binding protein 3 family.
 
  0.975
hisP-3
Histidine/lysine/arginine/ornithine transporter subunit ATP-binding component of ABC superfamily.
 
  0.969
glnQ
Glutamine transporter subunit ATP-binding component of ABC superfamily.
 
  0.960
gltL
Glutamate and aspartate transporter subunit ATP-binding component of ABC superfamily.
  
  0.932
hisJ
Belongs to the bacterial solute-binding protein 3 family.
 
  0.927
MPLA_670032
Glutamate/glutamine/aspartate/asparagine transport ATP-binding protein BztD.
 
  0.926
glnQ-2
Glutamine transporter subunit ATP-binding component of ABC superfamily.
  
  0.925
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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