Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1360031Uncharacterized protein. (163 aa)    
Predicted Functional Partners:
MPLA_680016
Putative translocation protein y4yR.
  
  
 0.860
nolT
Lipoprotein.
  
  
 0.847
sucA
annotation not available
    
 
 0.823
MPLA_680034
Putative translocation protein y4yO.
  
  
 0.817
MPLA_1800149
PAS sensor protein.
  
 
 0.801
MPLA_140225
Serine/threonine kinase.
   
 
 0.791
MPLA_1950002
Uncharacterized protein.
  
 
 0.790
MPLA_680035
Putative translocation protein y4yN.
  
  
 0.788
MPLA_720057
Histidine kinase.
  
 
 0.785
fliP-2
Flagellar biosynthesis protein.
  
  
 0.781
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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