Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1390070NIPSNAP family containing protein. (108 aa)    
Predicted Functional Partners:
MPLA_1390071
MR_MLE domain-containing protein.
       0.772
MPLA_1390069
Galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.522
MPLA_1650044
AsmA family protein.
   
    0.520
MPLA_250047
Uncharacterized protein.
   
    0.520
MPLA_1550061
Uncharacterized protein.
  
     0.485
MPLA_1390072
NAD-dependent epimerase/dehydratase.
  
     0.464
MPLA_30126
Uncharacterized protein.
  
     0.452
MPLA_680090
Uncharacterized protein.
  
     0.430
MPLA_100016
NAD-dependent epimerase/dehydratase.
  
     0.421
MPLA_70029
LssY_C domain-containing protein.
  
     0.420
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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