MPLA_1390076 protein (Mesorhizobium sp. ORS3359)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MPLA_1390076

Uncharacterized protein. (426 aa)

Predicted Functional Partners:

MPLA_1390077

0.955

MPLA_1390078

0.950

MPLA_1150015

0.870

MPLA_1150016

0.847

ugpC-4

0.845

MPLA_1150007

0.844

MPLA_140045

0.830

MPLA_160097

0.829

MPLA_140046

0.819

MPLA_1610014

0.819

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_1150007	MPLA_1150015	MPLA_1150007	MPLA_1150015	Sugar ABC transporter, permease protein.	Sorbitol/mannitol transport inner membrane protein.	0.839
MPLA_1150007	MPLA_1150016	MPLA_1150007	MPLA_1150016	Sugar ABC transporter, permease protein.	Binding-protein-dependent transport systems inner membrane component.	0.937
MPLA_1150007	MPLA_1390076	MPLA_1150007	MPLA_1390076	Sugar ABC transporter, permease protein.	Uncharacterized protein.	0.844
MPLA_1150007	MPLA_1390077	MPLA_1150007	MPLA_1390077	Sugar ABC transporter, permease protein.	Sugar ABC transporter, permease protein.	0.907
MPLA_1150007	MPLA_140046	MPLA_1150007	MPLA_140046	Sugar ABC transporter, permease protein.	Binding-protein-dependent transport systems inner membrane component.	0.904
MPLA_1150007	MPLA_160097	MPLA_1150007	MPLA_160097	Sugar ABC transporter, permease protein.	Binding-protein-dependent transport systems inner membrane component.	0.902
MPLA_1150007	MPLA_1610014	MPLA_1150007	MPLA_1610014	Sugar ABC transporter, permease protein.	Binding-protein-dependent transport systems inner membrane component.	0.481
MPLA_1150007	ugpC-4	MPLA_1150007	MPLA_1390080	Sugar ABC transporter, permease protein.	Glycerol-3-phosphate transporter subunit ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.	0.716
MPLA_1150015	MPLA_1150007	MPLA_1150015	MPLA_1150007	Sorbitol/mannitol transport inner membrane protein.	Sugar ABC transporter, permease protein.	0.839
MPLA_1150015	MPLA_1150016	MPLA_1150015	MPLA_1150016	Sorbitol/mannitol transport inner membrane protein.	Binding-protein-dependent transport systems inner membrane component.	0.995
MPLA_1150015	MPLA_1390076	MPLA_1150015	MPLA_1390076	Sorbitol/mannitol transport inner membrane protein.	Uncharacterized protein.	0.870
MPLA_1150015	MPLA_1390077	MPLA_1150015	MPLA_1390077	Sorbitol/mannitol transport inner membrane protein.	Sugar ABC transporter, permease protein.	0.801
MPLA_1150015	MPLA_140045	MPLA_1150015	MPLA_140045	Sorbitol/mannitol transport inner membrane protein.	ABC transporter, permease protein.	0.611
MPLA_1150015	MPLA_140046	MPLA_1150015	MPLA_140046	Sorbitol/mannitol transport inner membrane protein.	Binding-protein-dependent transport systems inner membrane component.	0.769
MPLA_1150015	MPLA_160097	MPLA_1150015	MPLA_160097	Sorbitol/mannitol transport inner membrane protein.	Binding-protein-dependent transport systems inner membrane component.	0.811
MPLA_1150015	ugpC-4	MPLA_1150015	MPLA_1390080	Sorbitol/mannitol transport inner membrane protein.	Glycerol-3-phosphate transporter subunit ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.	0.776
MPLA_1150016	MPLA_1150007	MPLA_1150016	MPLA_1150007	Binding-protein-dependent transport systems inner membrane component.	Sugar ABC transporter, permease protein.	0.937
MPLA_1150016	MPLA_1150015	MPLA_1150016	MPLA_1150015	Binding-protein-dependent transport systems inner membrane component.	Sorbitol/mannitol transport inner membrane protein.	0.995
MPLA_1150016	MPLA_1390076	MPLA_1150016	MPLA_1390076	Binding-protein-dependent transport systems inner membrane component.	Uncharacterized protein.	0.847
MPLA_1150016	MPLA_1390078	MPLA_1150016	MPLA_1390078	Binding-protein-dependent transport systems inner membrane component.	Putative sugar transporter subunit: permease component of ABC superfamily transporter.	0.812