Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1390083Putative ABC transporter (Protein fusion consisting of two ATP-binding domains and permease). (925 aa)    
Predicted Functional Partners:
MPLA_1390082
Putative ABC transporter (Permease protein).
 
 
 
0.960
MPLA_1390084
Putative HlyD-family secretion protein, yhiI-like protein.
 
  
 0.958
MPLA_720057
Histidine kinase.
  
 
 0.904
yejA
annotation not available
  
 0.880
yejA-2
annotation not available
  
 0.880
oppA
Oligopeptide transporter subunit periplasmic-binding component of ABC superfamily.
  
 0.880
MPLA_1830126
SBP_bac_5 domain-containing protein.
  
 0.880
cysA
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
   
 
  0.879
pstS
Phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
    
 0.866
mntR
DNA-binding transcriptional regulator of mntH.
    
  0.860
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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