Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1390130Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
MPLA_1390128
HTH cro/C1-type domain-containing protein.
       0.574
MPLA_1390129
Putative DNA-binding protein.
       0.574
MPLA_1850019
Uncharacterized protein.
  
     0.573
MPLA_950036
Uncharacterized protein.
  
     0.550
MPLA_1360072
Copper-bind domain-containing protein.
  
     0.469
MPLA_160107
Glycosyl transferase family protein.
  
     0.442
MPLA_560004
MOSC domain containing protein.
  
     0.423
MPLA_30146
Uncharacterized protein.
  
     0.420
MPLA_1390127
Epimerase domain-containing protein.
       0.417
MPLA_580034
Uncharacterized protein.
  
     0.402
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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