STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_140002Xylose isomerase domain protein TIM barrel. (303 aa)    
Predicted Functional Partners:
MPLA_140006
Uncharacterized oxidoreductase y4hM.
 
 
  0.787
MPLA_140003
Mannitol dehydrogenase domain-containing protein; Belongs to the mannitol dehydrogenase family.
    
  0.758
MPLA_140004
Short-chain dehydrogenase/reductase SDR.
       0.727
MPLA_1610027
Uncharacterized oxidoreductase y4hM.
 
 
  0.688
MPLA_1610028
Xylose isomerase domain-containing protein TIM barrel.
 
     0.687
MPLA_1610024
D-tagatose 3-epimerase.
 
     0.682
MPLA_250067
Oxidoreductase domain protein.
 
 
  0.678
MPLA_1620033
Oxidoreductase domain protein.
 
 
  0.631
MPLA_140051
Oxidoreductase domain-containing protein.
 
 
  0.627
trpE(G
Anthranilate synthase.
    
  0.589
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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