Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_140086Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
MPLA_140087
Uncharacterized protein.
 
     0.956
MPLA_140088
DUF892 domain-containing protein.
 
     0.634
MPLA_1530005
Uncharacterized protein.
  
  
 0.596
MPLA_190001
Uncharacterized protein.
  
  
 0.596
MPLA_680086
Response regulator receiver protein.
  
     0.580
MPLA_140085
Uncharacterized protein.
       0.572
MPLA_220002
UPF0229 protein MPLA_220002; Belongs to the UPF0229 family.
   
    0.566
MPLA_220001
Uncharacterized protein.
   
    0.534
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
   
    0.525
MPLA_140094
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein.
  
     0.502
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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