MPLA_140089 protein (Mesorhizobium sp. ORS3359)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MPLA_140089

Uncharacterized protein. (406 aa)

Predicted Functional Partners:

MPLA_140090

0.964

MPLA_140091

0.962

MPLA_140092

0.960

MPLA_140100

0.896

MPLA_1390030

0.835

MPLA_1120016

0.797

xoxF

0.797

MPLA_90080

0.797

MPLA_1390029

0.791

MPLA_1840017

0.791

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_1120016	MPLA_1390029	MPLA_1120016	MPLA_1390029	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.689
MPLA_1120016	MPLA_1390030	MPLA_1120016	MPLA_1390030	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.986
MPLA_1120016	MPLA_140089	MPLA_1120016	MPLA_140089	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Uncharacterized protein.	0.797
MPLA_1120016	MPLA_1840017	MPLA_1120016	MPLA_1840017	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Putative branched-chain amino acid ABC transporter (Permease protein); Belongs to the binding-protein-dependent transport system permease family.	0.663
MPLA_1390029	MPLA_1120016	MPLA_1390029	MPLA_1120016	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.689
MPLA_1390029	MPLA_1390030	MPLA_1390029	MPLA_1390030	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.997
MPLA_1390029	MPLA_140089	MPLA_1390029	MPLA_140089	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Uncharacterized protein.	0.791
MPLA_1390029	MPLA_90080	MPLA_1390029	MPLA_90080	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.892
MPLA_1390030	MPLA_1120016	MPLA_1390030	MPLA_1120016	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.986
MPLA_1390030	MPLA_1390029	MPLA_1390030	MPLA_1390029	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.997
MPLA_1390030	MPLA_140089	MPLA_1390030	MPLA_140089	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Uncharacterized protein.	0.835
MPLA_1390030	MPLA_1840017	MPLA_1390030	MPLA_1840017	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Putative branched-chain amino acid ABC transporter (Permease protein); Belongs to the binding-protein-dependent transport system permease family.	0.959
MPLA_1390030	MPLA_90080	MPLA_1390030	MPLA_90080	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.970
MPLA_140089	MPLA_1120016	MPLA_140089	MPLA_1120016	Uncharacterized protein.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.797
MPLA_140089	MPLA_1390029	MPLA_140089	MPLA_1390029	Uncharacterized protein.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.791
MPLA_140089	MPLA_1390030	MPLA_140089	MPLA_1390030	Uncharacterized protein.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.835
MPLA_140089	MPLA_140090	MPLA_140089	MPLA_140090	Uncharacterized protein.	40-residue YVTN family beta-propeller repeat protein.	0.964
MPLA_140089	MPLA_140091	MPLA_140089	MPLA_140091	Uncharacterized protein.	ABC transporter related protein.	0.962
MPLA_140089	MPLA_140092	MPLA_140089	MPLA_140092	Uncharacterized protein.	Transport permease protein.	0.960
MPLA_140089	MPLA_140100	MPLA_140089	MPLA_140100	Uncharacterized protein.	Extracellular solute-binding protein family 3.	0.896