Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MPLA_140099Cytochrome c class I. (177 aa)    
Predicted Functional Partners:
MPLA_140096
Cytochrome c oxidase subunit III.
 
 0.998
MPLA_2140035
Cytochrome c oxidase polypeptide I fixN homolog; Belongs to the heme-copper respiratory oxidase family.
 
 0.998
fixN
Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
 0.998
MPLA_2140034
Cytochrome c oxidase, cbb3-type, subunit II.
 
 0.997
MPLA_830029
Cytochrome c oxidase, cbb3-type, subunit II.
 
 0.997
MPLA_140097
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.996
MPLA_830028
Nitrogen fixation protein FixQ.
 
 0.996
MPLA_140098
Cytochrome c oxidase, subunit II.
 
 0.993
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.990
fixG
Nitrogen fixation protein FixG.
 
  
 0.963
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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