Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_140100Extracellular solute-binding protein family 3. (289 aa)    
Predicted Functional Partners:
xoxF
Putative dehydrogenase xoxF.
 
 
 0.985
MPLA_140089
Uncharacterized protein.
 
 
  0.896
gfa
Glutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family.
 
  
 0.891
MPLA_140096
Cytochrome c oxidase subunit III.
 
   
 0.887
MPLA_140092
Transport permease protein.
  
  
  0.875
MPLA_140093
Cytochrome c domain-containing protein.
 
     0.872
MPLA_140099
Cytochrome c class I.
 
  
  0.869
MPLA_140094
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein.
 
     0.863
MPLA_140091
ABC transporter related protein.
  
  
  0.829
MPLA_140098
Cytochrome c oxidase, subunit II.
 
     0.825
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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