STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_140124Glyco_tran_28_C domain-containing protein. (376 aa)    
Predicted Functional Partners:
MPLA_140123
Glycosyltransferase RedB.
 
     0.946
MPLA_140129
Uncharacterized protein.
     0.933
MPLA_140122
Glyco_tran_28_C domain-containing protein.
 
    
0.877
MPLA_140138
Uncharacterized protein.
 
     0.788
MPLA_140126
Uncharacterized protein.
 
     0.777
MPLA_1700023
ABC transmembrane type-1 domain-containing protein.
 
     0.775
MPLA_140135
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein.
  
     0.772
MPLA_140130
Uncharacterized protein.
  
     0.771
MPLA_140119
Uncharacterized protein.
 
     0.754
MPLA_140137
Oligopeptide ABC transporter, permease protein.
  
     0.742
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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