STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbsA-5Ribose import ATP-binding protein RbsA 1. (500 aa)    
Predicted Functional Partners:
MPLA_140160
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  0.943
yphD
Putative sugar transporter subunit: membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
 
  0.941
MPLA_140159
Periplasmic-binding protein/LacI transcriptional regulator.
 
  0.903
araH
Fused L-arabinose transporter subunits of ABC superfamily: membrane components; Belongs to the binding-protein-dependent transport system permease family.
  
  0.874
rbsC-2
D-ribose transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
  
  0.852
MPLA_140059
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.851
MPLA_100025
Putative sugar ABC transporter, permease protein ribose ABC transporter rbsC-like; Belongs to the binding-protein-dependent transport system permease family.
 
  0.817
MPLA_1170021
Sugar (Ribose) ABC transporter (Permease); Belongs to the binding-protein-dependent transport system permease family.
  
  0.816
MPLA_770012
Ribose ABC transporter, ribose-binding protein.
  
  0.805
MPLA_1650054
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  0.788
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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