STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_140170Putative TIM-barrel fold metal-dependent hydrolase. (284 aa)    
Predicted Functional Partners:
pld
Pyridoxal 4-dehydrogenase.
 
  0.841
MPLA_140169
Aldo/keto reductase.
  
 
  0.814
MPLA_140168
Uncharacterized protein.
       0.773
MPLA_340084
L-fuconate dehydratase.
 
  
  0.711
MPLA_140167
GntR family transcriptional regulator.
       0.601
MPLA_670021
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.590
MPLA_1100019
Ferredoxin.
     
 0.584
yeaX
Putative dioxygenase subunit.
     
 0.584
MPLA_340089
Mandelate racemase/muconate lactonizing protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.563
xdhA
Xanthine dehydrogenase, molybdenum binding subunit.
     
  0.560
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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