STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbsC-2D-ribose transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family. (333 aa)    
Predicted Functional Partners:
MPLA_140189
Putative Ribose import ATP-binding protein RbsA.
 
  0.937
MPLA_140188
Putative D-ribose-binding protein.
 
  0.913
MPLA_770012
Ribose ABC transporter, ribose-binding protein.
  
  0.890
araG
Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
  
  0.874
rbsA-2
Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components.
  
  0.861
alsB
D-allose transporter subunit periplasmic-binding component of ABC superfamily.
  
  0.854
rbsA-5
Ribose import ATP-binding protein RbsA 1.
  
  0.852
MPLA_140159
Periplasmic-binding protein/LacI transcriptional regulator.
  
  0.848
MPLA_1620019
Periplasmic ribose-binding protein, sugar ABC transporter.
  
  0.846
MPLA_140037
Putative D-ribose ABC transporter, periplasmic protein.
  
  0.842
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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