Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slyXProtein SlyX homolog; Belongs to the SlyX family. (69 aa)    
Predicted Functional Partners:
MPLA_140230
Uncharacterized protein.
       0.715
MPLA_1520005
Histidine triad (HIT) protein.
  
    0.664
MPLA_970016
Uncharacterized protein.
  
     0.652
MPLA_30076
DUF3971 domain-containing protein.
  
     0.632
MPLA_140322
Uncharacterized protein.
  
     0.614
MPLA_1700026
Acetyltransf_6 domain-containing protein.
  
     0.602
MPLA_1540011
Uncharacterized protein.
  
     0.591
MPLA_1780024
Uncharacterized protein.
  
     0.582
MPLA_1650035
Uncharacterized protein.
  
     0.566
MPLA_140235
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.555
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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