STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yufO-3Uncharacterized ABC transporter ATP-binding protein YufO. (510 aa)    
Predicted Functional Partners:
MPLA_140233
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
MPLA_140234
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
MPLA_530013
Sugar ABC transporter, permease protein RbsC-2; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.964
MPLA_530014
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.963
MPLA_1830116
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.958
MPLA_1390057
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.957
MPLA_1830115
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.955
MPLA_1390100
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.951
MPLA_140229
Basic membrane lipoprotein.
 
 
 0.951
MPLA_1390056
ABC transporter membrane spanning protein (Sugar); Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.945
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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