STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dgdRHTH-type transcriptional regulator DgdR; Belongs to the LysR transcriptional regulatory family. (285 aa)    
Predicted Functional Partners:
MPLA_580011
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.748
MPLA_1670019
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.711
MPLA_1390048
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.710
MPLA_90034
Bacterial regulatory helix-turn-helix protein, LysR family protein 122; Belongs to the LysR transcriptional regulatory family.
  
     0.706
MPLA_30043
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.703
MPLA_160043
LysR substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
     0.695
MPLA_1850044
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.692
MPLA_720031
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.689
MPLA_770042
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.689
MPLA_930028
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.686
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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