STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rhlGRhamnolipids biosynthesis 3-oxoacyl-(Acyl-carrier-protein) reductase. (271 aa)    
Predicted Functional Partners:
MPLA_870003
AMP-dependent synthetase and ligase.
  
 0.901
MPLA_140266
Acyl-CoA dehydrogenase.
 
  0.814
nodN
Nodulation protein N.
 
  0.798
MPLA_140263
Aminoglycoside phosphotransferase.
 
  0.772
MPLA_140261
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.759
MPLA_140267
NADH oxidoreductase.
 
 
  0.759
MPLA_90043
Uncharacterized short-chain type dehydrogenase/reductase y4eK; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.694
MPLA_230034
ANK_REP_REGION domain-containing protein.
    
  0.677
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.644
MPLA_340110
Short-chain dehydrogenase/reductase family protein.
  
     0.641
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.