STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhlGRhamnolipids biosynthesis 3-oxoacyl-(Acyl-carrier-protein) reductase. (271 aa)    
Predicted Functional Partners:
MPLA_870003
AMP-dependent synthetase and ligase.
  
 0.812
MPLA_140261
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.749
MPLA_140266
Acyl-CoA dehydrogenase.
 
  0.749
nodN
Nodulation protein N.
 
  0.748
MPLA_140263
Aminoglycoside phosphotransferase.
 
  0.728
MPLA_140267
NADH oxidoreductase.
 
  0.680
MPLA_670021
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.662
MPLA_340110
Short-chain dehydrogenase/reductase family protein.
  
     0.641
MPLA_1100019
Ferredoxin.
   
 0.638
yeaX
Putative dioxygenase subunit.
   
 0.638
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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