Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_140270Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
MPLA_140269
Glycosyl transferase family 2.
 
  
 0.883
MPLA_140271
GtrA family protein.
       0.794
MPLA_140268
Uncharacterized protein.
       0.785
MPLA_930054
dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.700
melA
Alpha-galactosidase, NAD(P)-binding.
  
 
 0.660
melA-2
Alpha-galactosidase.
  
 
 0.660
MPLA_30006
PMT_2 domain-containing protein.
 
  
 0.634
MPLA_1170054
PTS system fructose subfamily IIA component.
     
  0.494
MPLA_30078
Glycosyl transferase family protein.
  
  
 0.453
ykcC
Uncharacterized glycosyltransferase YkcC.
 
  
 0.447
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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