STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
potG-2Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (354 aa)    
Predicted Functional Partners:
MPLA_140284
Binding-protein-dependent transport systems inner membrane component.
 
  0.988
MPLA_140283
Sulfate ABC transporter, permease protein.
 
  
 0.926
yurJ
Uncharacterized ABC transporter ATP-binding protein YurJ; Belongs to the ABC transporter superfamily.
  
  
 
0.909
potG
Putrescine transporter subunit: ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.
  
  
 
0.908
ugpC-7
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
  
 
0.908
smoK-2
ATP-binding transport protein SmoK; Belongs to the ABC transporter superfamily.
  
  
 
0.908
MPLA_140282
Family 1 extracellular solute-binding protein.
 
 
 0.906
znuB
Zinc transporter subunit: membrane component of ABC superfamily.
     
 0.899
ugpC-3
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
  
 
0.898
yehZ
Putative transporter subunit: periplasmic-binding component of ABC superfamily.
    
  0.898
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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