STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_140292Short-chain dehydrogenase/reductase SDR. (253 aa)    
Predicted Functional Partners:
MPLA_870003
AMP-dependent synthetase and ligase.
  
 0.901
MPLA_140293
Glucose-methanol-choline oxidoreductase.
 
  
  0.871
betA-2
Choline dehydrogenase, a flavoprotein.
 
  
  0.839
MPLA_140290
Stress-response A/B barrel domain-containing protein.
 
     0.809
MPLA_140262
Uncharacterized oxidoreductase TM_0325.
  
     0.732
MPLA_860072
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.709
MPLA_1850030
Short-chain dehydrogenase/reductase SDR.
  
     0.708
MPLA_1350054
Short-chain dehydrogenase/reductase SDR.
  
     0.698
MPLA_140300
Acetate CoA-transferase YdiF; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
 
  
  0.678
MPLA_230034
ANK_REP_REGION domain-containing protein.
    
  0.677
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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