STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ugpC-5Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (371 aa)    
Predicted Functional Partners:
MPLA_140295
Binding-protein-dependent transport systems inner membrane component.
 
  0.987
MPLA_140296
ABC transmembrane type-1 domain-containing protein.
 
  0.984
MPLA_140297
Putative sugar-binding periplasmic protein.
 
  0.963
MPLA_1620030
Binding-protein-dependent transport systems inner membrane component.
  
  0.944
MPLA_1390066
Family 1 extracellular solute-binding protein.
   
  0.939
MPLA_520034
Uncharacterized protein.
   
  0.939
MPLA_720063
Extracellular solute-binding protein family 1.
   
  0.939
MPLA_1620029
Binding-protein-dependent transport systems inner membrane component.
  
  0.923
MPLA_1150016
Binding-protein-dependent transport systems inner membrane component.
  
  0.917
aglG
Alpha-glucoside transport system permease protein AglG.
  
  0.914
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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