Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
afr1,5-anhydro-D-fructose reductase. (338 aa)    
Predicted Functional Partners:
MPLA_140302
LacI family transcriptional regulator.
 
     0.867
MPLA_140300
Acetate CoA-transferase YdiF; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
 
     0.854
ALDH2C
Aldehyde dehydrogenase family 2 member C4.
  
 
  0.802
MPLA_140299
Enoyl-CoA hydratase/isomerase.
       0.792
MPLA_1390087
Oxidoreductase domain protein.
  
     0.692
MPLA_140297
Putative sugar-binding periplasmic protein.
 
     0.687
MPLA_140293
Glucose-methanol-choline oxidoreductase.
 
     0.663
MPLA_140044
Xylose isomerase domain protein TIM barrel.
  
 
  0.611
MPLA_140292
Short-chain dehydrogenase/reductase SDR.
 
  
  0.588
MPLA_1390090
Xylose isomerase domain protein TIM barrel.
  
 
  0.585
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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