STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_140305DUF1330 domain-containing protein. (97 aa)    
Predicted Functional Partners:
MPLA_140304
Uncharacterized protein.
       0.675
MPLA_140303
Uncharacterized protein.
 
     0.558
nodH
Nodulation protein H.
  
     0.530
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
  0.529
noeK-2
Phosphomannomutase.
  
  
  0.521
MPLA_1620081
Tetratricopeptide TPR_2 repeat protein.
  
     0.507
MPLA_290004
TPR_REGION domain-containing protein.
  
     0.480
MPLA_1340008
DUF4440 domain-containing protein.
  
     0.461
noeK
Phosphomannomutase.
     
  0.458
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
  0.458
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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