Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1430036Metalloprotease transporter. (585 aa)    
Predicted Functional Partners:
MPLA_1430035
Membrane fusion protein (MFP) family protein.
 
  
 0.951
exsH
Endo-1,3-1,4-beta-glycanase ExsH.
 
 
   0.837
prsD-3
Type I secretion system ATP-binding protein PrsD.
  
  
 
0.814
prsD-2
Type I secretion system ATP-binding protein PrsD.
  
  
 
0.809
MPLA_1860014
Membrane fusion protein (MFP) family protein.
 
  
 0.795
prsE
Membrane fusion protein (MFP) family protein.
 
  
 0.794
prsE-2
Membrane fusion protein (MFP) family protein.
 
  
 0.794
prsE-3
Membrane fusion protein (MFP) family protein.
 
  
 0.794
MPLA_870037
Membrane fusion protein (MFP) family protein.
 
  
 0.794
MPLA_1830215
Uncharacterized protein.
 
  
 0.793
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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