MPLA_150010 protein (Mesorhizobium sp. ORS3359)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MPLA_150010

Uncharacterized protein. (85 aa)

Predicted Functional Partners:

MPLA_1700026

0.728

MPLA_1650035

0.712

hemF

0.689

MPLA_1650012

0.687

MPLA_1650011

0.680

MPLA_180060

0.671

MPLA_230024

0.666

MPLA_230059

0.651

MPLA_970016

0.650

MPLA_140322

0.649

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_140322	MPLA_150010	MPLA_140322	MPLA_150010	Uncharacterized protein.	Uncharacterized protein.	0.649
MPLA_140322	MPLA_1650011	MPLA_140322	MPLA_1650011	Uncharacterized protein.	O-antigen polymerase.	0.674
MPLA_140322	MPLA_1650012	MPLA_140322	MPLA_1650012	Uncharacterized protein.	Glycosyl transferase family 2.	0.537
MPLA_140322	MPLA_1650035	MPLA_140322	MPLA_1650035	Uncharacterized protein.	Uncharacterized protein.	0.544
MPLA_140322	MPLA_1700026	MPLA_140322	MPLA_1700026	Uncharacterized protein.	Acetyltransf_6 domain-containing protein.	0.745
MPLA_140322	MPLA_180060	MPLA_140322	MPLA_180060	Uncharacterized protein.	Uncharacterized protein.	0.611
MPLA_140322	MPLA_230059	MPLA_140322	MPLA_230059	Uncharacterized protein.	Uncharacterized protein.	0.449
MPLA_140322	MPLA_970016	MPLA_140322	MPLA_970016	Uncharacterized protein.	Uncharacterized protein.	0.515
MPLA_150010	MPLA_140322	MPLA_150010	MPLA_140322	Uncharacterized protein.	Uncharacterized protein.	0.649
MPLA_150010	MPLA_1650011	MPLA_150010	MPLA_1650011	Uncharacterized protein.	O-antigen polymerase.	0.680
MPLA_150010	MPLA_1650012	MPLA_150010	MPLA_1650012	Uncharacterized protein.	Glycosyl transferase family 2.	0.687
MPLA_150010	MPLA_1650035	MPLA_150010	MPLA_1650035	Uncharacterized protein.	Uncharacterized protein.	0.712
MPLA_150010	MPLA_1700026	MPLA_150010	MPLA_1700026	Uncharacterized protein.	Acetyltransf_6 domain-containing protein.	0.728
MPLA_150010	MPLA_180060	MPLA_150010	MPLA_180060	Uncharacterized protein.	Uncharacterized protein.	0.671
MPLA_150010	MPLA_230024	MPLA_150010	MPLA_230024	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.666
MPLA_150010	MPLA_230059	MPLA_150010	MPLA_230059	Uncharacterized protein.	Uncharacterized protein.	0.651
MPLA_150010	MPLA_970016	MPLA_150010	MPLA_970016	Uncharacterized protein.	Uncharacterized protein.	0.650
MPLA_150010	hemF	MPLA_150010	MPLA_150011	Uncharacterized protein.	Coproporphyrinogen oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.	0.689
MPLA_1650011	MPLA_140322	MPLA_1650011	MPLA_140322	O-antigen polymerase.	Uncharacterized protein.	0.674
MPLA_1650011	MPLA_150010	MPLA_1650011	MPLA_150010	O-antigen polymerase.	Uncharacterized protein.	0.680