STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1520007Stress responsive alpha-beta barrel domain protein. (100 aa)    
Predicted Functional Partners:
MPLA_1520006
NUDIX hydrolase.
       0.761
MPLA_1390066
Family 1 extracellular solute-binding protein.
  
     0.682
MPLA_340100
Ribose ABC transporter, substrate-binding protein.
  
     0.659
MPLA_1520005
Histidine triad (HIT) protein.
       0.641
MPLA_1720001
ThuA domain-containing protein.
  
     0.527
MPLA_1230032
Uncharacterized protein.
  
     0.526
MPLA_1800116
Sulphotransf domain-containing protein.
  
     0.492
MPLA_180029
Stf0 sulfotransferase.
  
     0.484
MPLA_140044
Xylose isomerase domain protein TIM barrel.
  
     0.483
MPLA_100022
Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.
  
     0.477
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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