Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1520020Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
MPLA_1520021
ATP-dependent DNA ligase.
 
 0.984
MPLA_1620047
Uncharacterized protein.
    
 0.905
MPLA_340150
Uncharacterized protein.
    
 0.905
MPLA_930007
WD-repeart protein, beta transducin-like.
    
 0.905
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.876
MPLA_1620050
Uncharacterized protein.
   
 0.863
MPLA_2130062
ATP dependent DNA ligase.
 
 
 0.841
MPLA_2130012
DNA ligase D.
 
 
 0.840
MPLA_1380009
DEAD/H associated domain protein.
 
    0.833
MPLA_1870017
DNA_LIGASE_A3 domain-containing protein.
 
 
 0.831
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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