Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yehWPutative transporter subunit: permease component of ABC superfamily transporter. (249 aa)    
Predicted Functional Partners:
yehZ
Putative transporter subunit: periplasmic-binding component of ABC superfamily.
 
 0.999
yehX
Putative transporter subunit: ATP-binding component of ABC superfamily transporter.
 
 0.999
yehY
Putative transporter subunit: permease component of ABC superfamily.
 
  
 
0.978
MPLA_940018
Glycine betaine/proline ABC transporter, ATP-binding protein.
 
 
 0.887
MPLA_160015
ABC transporter ATP-binding protein.
 
 
 0.882
MPLA_1390083
Putative ABC transporter (Protein fusion consisting of two ATP-binding domains and permease).
     
  0.819
MPLA_160016
Choline ABC transporter, permease protein.
 
 
 
0.814
MPLA_940017
Glycine betaine/proline ABC transporter, permease protein.
 
 
 
0.813
MPLA_160017
Choline ABC transporter, periplasmic binding protein.
 
 
 0.802
MPLA_730071
Choline ABC transporter, periplasmic binding protein.
 
 
 0.798
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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