Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_1600013Transcriptional regulator, GntR family. (232 aa)    
Predicted Functional Partners:
MPLA_660017
GntR family transcription regulator.
  
     0.773
MPLA_1830219
Putative Uncharacterized HTH-type transcriptional regulator in unstable DNA locus.
  
     0.772
MPLA_750084
Putative Transcriptional regulator.
  
     0.769
MPLA_1230024
Putative transcriptional regulator.
  
    0.757
MPLA_140167
GntR family transcriptional regulator.
  
    0.748
MPLA_1610022
GntR domain protein.
  
    0.748
MPLA_140165
GntR family transcriptional regulator.
  
    0.745
MPLA_1100044
GntR family transcription regulator.
  
     0.739
pdhR
GntR family transcriptional regulator.
  
    0.689
yieP
Putative transcriptional regulator.
  
    0.661
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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