STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_160016Choline ABC transporter, permease protein. (284 aa)    
Predicted Functional Partners:
MPLA_160015
ABC transporter ATP-binding protein.
 
 0.999
MPLA_160017
Choline ABC transporter, periplasmic binding protein.
 
 0.999
MPLA_730071
Choline ABC transporter, periplasmic binding protein.
 
 0.997
MPLA_940018
Glycine betaine/proline ABC transporter, ATP-binding protein.
 
 0.995
MPLA_940015
Amino acid ABC transporter periplasmic amino acid-binding protein.
 
 0.994
yehZ
Putative transporter subunit: periplasmic-binding component of ABC superfamily.
 
 
 0.954
MPLA_940017
Glycine betaine/proline ABC transporter, permease protein.
  
  
 
0.912
znuB
Zinc transporter subunit: membrane component of ABC superfamily.
     
 0.907
MPLA_780003
Putative dipeptide ABC transporter (Substrate-binding protein).
  
  
  0.907
cysA
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
     
  0.896
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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