STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ydhPPutative efflux protein MFS family. (390 aa)    
Predicted Functional Partners:
trpE(G
Anthranilate synthase.
    
  0.588
MPLA_160031
17 kDa surface antigen.
       0.497
MPLA_160032
Mercuric reductase.
       0.497
MPLA_160034
Succinylglutamate desuccinylase/aspartoacylase.
       0.488
MPLA_1650004
TolC family type I secretion outer membrane protein.
   
 0.448
MPLA_300008
RND efflux system, outer membrane lipoprotein, NodT family.
   
 0.448
bepC
Outer membrane efflux protein BepC.
   
  0.445
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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